Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_1209PFAM: sugar transferase; KEGG: rme:Rmet_2718 sugar transferase. (436 aa)    
Predicted Functional Partners:
Aave_1210
PFAM: glycosyl transferase, group 1; KEGG: rme:Rmet_2717 glycosyl transferase, group 1.
 
  
 0.916
Aave_0948
KEGG: dar:Daro_2389 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein.
  
  
 0.913
Aave_4142
PFAM: glycosyl transferase, family 2; Methionine biosynthesis MetW; Methyltransferase type 11; Methyltransferase type 12; KEGG: rru:Rru_B0044 glycosyl transferase, family 2.
  
  
 0.835
Aave_4407
PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1; KEGG: xcb:XC_2258 O-antigen biosynthesis protein.
  
  
 0.755
Aave_1211
PFAM: peptidase S16, lon domain protein; KEGG: pol:Bpro_3619 peptidase S16, lon-like.
       0.707
Aave_3830
Protein of unknown function DUF59; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.691
Aave_2849
KEGG: xcv:XCV4246 putative acetyltransferase.
  
  
 0.685
Aave_0952
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cvi:CV4124 probable aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.660
Aave_4330
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dvu:DVUA0045 aminotransferase, DegT/DnrJ/EryC1/StrS family; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.602
Aave_1207
PFAM: glycosyl transferase, group 1; KEGG: pfo:Pfl_2019 glycosyl transferase, group 1.
 
  
 0.596
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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