Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_1256PFAM: phospholipase D/Transphosphatidylase; KEGG: pol:Bpro_4230 phospholipase D/transphosphatidylase. (625 aa)    
Predicted Functional Partners:
Aave_0430
Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
     
 0.906
Aave_0219
Phospholipase C; PFAM: phosphoesterase; protein of unknown function DUF756; KEGG: bcn:Bcen_5326 twin-arginine translocation pathway signal.
     
 0.904
Aave_1377
Phospholipase C; PFAM: phosphoesterase; protein of unknown function DUF756; KEGG: bpm:BURPS1710b_A1577 phospholipase C.
     
 0.904
Aave_4631
PFAM: leucine-rich repeat protein; KEGG: xcb:XC_1553 leucin rich protein.
   
 0.482
Aave_1969
KEGG: rme:Rmet_5901 hypothetical protein.
 
     0.462
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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