Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_1371KEGG: bbr:BB3605 putative iron uptake protein. (102 aa)    
Predicted Functional Partners:
Aave_1369
KEGG: pfl:PFL_0987 hypothetical protein.
  
    0.980
Aave_1370
PFAM: PepSY-associated TM helix domain protein; KEGG: bbr:BB3604 putative iron uptake protein.
 
    0.962
Aave_1367
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: bbr:BB1785 putative ferrisiderophore receptor.
 
    0.916
Aave_3728
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: xac:XAC2185 ferrichrome-iron receptor.
 
    0.880
Aave_1372
PFAM: TonB-dependent receptor, plug; KEGG: rso:RSc0800 putative ferrisiderophore receptor signal peptide protein.
  
  
 0.798
Aave_1368
KEGG: bxe:Bxe_C0724 hypothetical protein.
 
     0.667
Aave_3576
KEGG: ppu:PP_2462 hypothetical protein.
  
     0.667
Aave_4788
Flavodoxin/nitric oxide synthase; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; PepSY-associated TM helix domain protein; flavodoxin/nitric oxide synthase; KEGG: pen:PSEEN1028 sulfite reductase flavoprotein alpha-component; iron-regulated membrane protein.
 
    0.595
Aave_2242
KEGG: xcb:XC_3476 hypothetical protein.
  
     0.570
Aave_3737
RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: nmu:Nmul_A1839 sigma-24 (FecI-like); Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.556
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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