STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_1477PFAM: protein of unknown function DUF877; KEGG: bbr:BB0801 hypothetical protein. (499 aa)    
Predicted Functional Partners:
Aave_1476
PFAM: uncharacterized conserved protein UCP028301; KEGG: bte:BTH_II0121 protein of unknown function (DUF770) superfamily.
 
 0.999
Aave_1472
PFAM: OmpA/MotB domain protein; KEGG: bbr:BB0815 hypothetical protein.
 
  
 0.996
Aave_1465
PFAM: protein of unknown function DUF796; KEGG: bpa:BPP0716 hypothetical protein.
 
 
 0.989
Aave_1479
PFAM: protein of unknown function DUF1316; KEGG: bbr:BB0804 hypothetical protein.
 
  
 0.965
Aave_1480
PFAM: protein of unknown function DUF879; KEGG: bpa:BPP0719 hypothetical protein.
 
  
 0.964
Aave_1478
PFAM: virulence protein, SciE type; KEGG: xac:XAC4144 hypothetical protein.
 
    0.963
Aave_1475
PFAM: ImpA domain protein; KEGG: bps:BPSS2101 hypothetical protein.
 
  
 0.956
Aave_1482
PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: xac:XAC4140 ClpB; Belongs to the ClpA/ClpB family.
 
 
 0.954
Aave_1473
PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: bbr:BB0816 hypothetical protein.
 
  
 0.944
Aave_1481
PFAM: protein of unknown function DUF1305; KEGG: bur:Bcep18194_B1583 protein of unknown function DUF1305.
 
  
 0.942
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.