Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_1508PFAM: leucine-rich repeat protein; filamentation induced by cAMP protein Fic; KEGG: xcb:XC_1553 leucin rich protein. (653 aa)    
Predicted Functional Partners:
Aave_0458
SMART: Leucine-rich repeat, ribonuclease inhibitor subtype; KEGG: rso:RSc1801 GalA protein 3.
  
   
 0.654
Aave_1507
TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: pae:PA4235 bacterioferritin; Belongs to the bacterioferritin family.
       0.548
Aave_4631
PFAM: leucine-rich repeat protein; KEGG: xcb:XC_1553 leucin rich protein.
 
 
  
0.523
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.488
Aave_4710
PFAM: ubiquitin; KEGG: ptr:454140 LOC454140.
  
   
 0.409
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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