Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_1614KEGG: net:Neut_1474 HNH endonuclease. (130 aa)    
Predicted Functional Partners:
Aave_1616
PFAM: phage Terminase; KEGG: ppu:PP_3881 phage terminase, large subunit, putative.
 
  
 0.910
Aave_1617
TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: ppu:PP_3879 phage portal protein, HK97 family.
 
  
 0.851
Aave_1768
PFAM: phage Terminase; KEGG: bps:BPSL1143 putative phage terminase.
 
  
 0.836
Aave_1615
TIGRFAM: phage terminase, small subunit, putative, P27 family; KEGG: nfa:nfa380 hypothetical protein.
 
    0.795
Aave_1772
TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: eba:ebA5484 putative phage portal protein.
 
  
 0.725
Aave_1619
TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; KEGG: ppu:PP_3877 hypothetical protein.
 
   
 0.718
Aave_1622
PFAM: phage head-tail adaptor, putative; KEGG: rso:RSc1686 probable phage HK022 GP9-related protein.
 
    0.492
Aave_1613
Hypothetical protein.
       0.486
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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