Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_1628PFAM: Prophage tail length tape measure; KEGG: rso:RSc1690 probable phage HK97 tail length TAPE measure-related protein. (1906 aa)    
Predicted Functional Partners:
Aave_1629
PFAM: Carbohydrate-binding family V/XII; KEGG: rsp:RSP_3763 hypothetical protein.
 
 
   0.947
Aave_1630
Hypothetical protein; KEGG: eci:UTI89_C1519 putative tail fiber protein.
  
  
 0.819
Aave_1783
PFAM: Carbohydrate-binding family V/XII; KEGG: rsp:RSP_3763 hypothetical protein.
 
 
   0.776
Aave_1721
KEGG: ngo:NGO1092 hypothetical protein, putative phage associated protein.
 
    0.775
Aave_1631
KEGG: rno:678915 hypothetical protein LOC678915.
       0.773
Aave_1632
KEGG: nmu:Nmul_A1447 hypothetical protein.
       0.773
Aave_4148
KEGG: eba:ebA1598 hypothetical protein.
  
     0.712
Aave_1633
KEGG: mag:amb0396 hypothetical protein.
 
     0.697
Aave_3551
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; KEGG: rfr:Rfer_2663 putative type-4 fimbrial biogenesis PilY1-related signal peptide protein.
  
     0.656
Aave_1622
PFAM: phage head-tail adaptor, putative; KEGG: rso:RSc1686 probable phage HK022 GP9-related protein.
 
     0.646
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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