Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_1698PFAM: Terminase small subunit; KEGG: sit:TM1040_0800 terminase small subunit. (336 aa)    
Predicted Functional Partners:
Aave_1699
KEGG: ret:RHE_CH01093 putative terminase large subunit protein.
 
  
 0.752
Aave_1691
Hypothetical protein; KEGG: bbr:BB1683 phage-related hypothetical protein.
  
  
 0.593
Aave_1700
KEGG: ngo:NGO1097 hypothetical protein, putative phage associated protein.
       0.554
Aave_1690
Uncharacterized phage-encoded protein; KEGG: ypn:YPN_1572 phage regulatory protein.
       0.544
Aave_1697
KEGG: ngo:NGO1101 hypothetical protein, putative phage associated protein.
       0.542
Aave_1687
Putative transcriptional regulator, XRE family.
       0.536
Aave_1688
Hypothetical protein.
       0.536
Aave_1689
Hypothetical protein.
       0.536
Aave_1692
KEGG: psb:Psyr_2809 hypothetical protein.
       0.536
Aave_1693
Hypothetical protein.
       0.536
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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