Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_1906KEGG: eba:ebA5933 transposition helper protein. (157 aa)    
Predicted Functional Partners:
Aave_1907
PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase.
 
     0.937
Aave_2773
PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase.
  
     0.741
Aave_3763
PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase.
  
     0.741
Aave_4357
PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase.
  
     0.741
Aave_0694
PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase.
  
     0.736
Aave_0720
PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase.
  
     0.736
Aave_1073
PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase.
  
     0.736
Aave_1103
PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase.
  
     0.736
Aave_1517
PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase.
  
     0.736
Aave_2135
PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase.
  
     0.736
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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