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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_1920PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: pen:PSEEN0741 hypothetical protein. (284 aa)    
Predicted Functional Partners:
Aave_1919
KEGG: pfo:Pfl_0164 hypothetical protein.
 
    0.954
Aave_1917
PFAM: phage Tail Collar domain protein; KEGG: mxa:MXAN_0326 phage tail collar domain protein.
 
     0.921
Aave_2193
PFAM: sulfatase; protein of unknown function DUF1705; KEGG: pol:Bpro_3130 sulfatase.
     
 0.904
Aave_1918
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: pol:Bpro_1622 extracellular ligand-binding receptor; TC 3.A.1.4.-.
 
     0.801
Aave_4496
KEGG: aba:Acid345_1191 hypothetical protein.
 
    0.789
Aave_1921
PFAM: Collagen triple helix repeat; KEGG: dsy:DSY0622 hypothetical protein.
       0.705
Aave_4235
PFAM: phage Tail Collar domain protein; KEGG: chu:CHU_2872 conserved hypothetical protein; possible microcystin dependent.
  
     0.701
Aave_4236
PFAM: phage Tail Collar domain protein; KEGG: pen:PSEEN0745 phage tail collar.
  
     0.698
Aave_1922
KEGG: dar:Daro_1057 twin-arginine translocation pathway signal.
       0.464
Aave_1923
KEGG: hch:HCH_00181 predicted periplasmic lipoprotein.
       0.464
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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