STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_2067PFAM: glycosyltransferase sugar-binding region containing DXD motif; KEGG: cme:CMS086C hypothetical protein, conserved Pfam: Gly_transf_sug. (304 aa)    
Predicted Functional Partners:
Aave_2068
KEGG: aeh:Mlg_2351 hypothetical protein.
 
  
 0.869
Aave_2065
PFAM: glycosyl transferase, group 1; KEGG: aeh:Mlg_2350 glycosyl transferase, group 1.
 
  
 0.841
Aave_2069
PFAM: glycosyl transferase, family 2; KEGG: dge:Dgeo_0345 glycosyl transferase, family 2.
  
  
 0.811
Aave_2066
PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: aeh:Mlg_2321 ABC transporter-related protein.
       0.776
Aave_4142
PFAM: glycosyl transferase, family 2; Methionine biosynthesis MetW; Methyltransferase type 11; Methyltransferase type 12; KEGG: rru:Rru_B0044 glycosyl transferase, family 2.
  
 
 0.489
Aave_2070
PFAM: inositol monophosphatase; KEGG: rfr:Rfer_2892 inositol-1(or 4)-monophosphatase.
       0.445
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.