rpsU protein (Acidovorax citrulli) - STRING interaction network

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rpsU

PFAM: ribosomal protein S21; KEGG: rfr:Rfer_2885 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (70 aa)

Predicted Functional Partners:

rpsT

0.991

rpsP

0.989

rpmB

0.989

rpmI

0.988

rplU

0.988

rpsO

0.987

rpsF

0.986

rplM

0.986

rpsL

0.985

rpsB

0.984

Your Current Organism:

Acidovorax citrulli

NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	Aave_4053	Aave_3675	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.991
rplM	rpmB	Aave_4053	Aave_3428	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein L28; KEGG: tbd:Tbd_2589 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.990
rplM	rpmI	Aave_4053	Aave_2857	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein L35; KEGG: pol:Bpro_2104 ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.990
rplM	rpsB	Aave_4053	Aave_1823	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S2; KEGG: pol:Bpro_2695 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.995
rplM	rpsF	Aave_4053	Aave_1228	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.990
rplM	rpsL	Aave_4053	Aave_0333	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy.	0.995
rplM	rpsO	Aave_4053	Aave_1258	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.994
rplM	rpsP	Aave_4053	Aave_1884	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S16; KEGG: pol:Bpro_1690 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.992
rplM	rpsT	Aave_4053	Aave_1167	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.	0.991
rplM	rpsU	Aave_4053	Aave_2092	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S21; KEGG: rfr:Rfer_2885 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.986
rplU	rplM	Aave_3675	Aave_4053	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.991
rplU	rpmB	Aave_3675	Aave_3428	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein L28; KEGG: tbd:Tbd_2589 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.991
rplU	rpmI	Aave_3675	Aave_2857	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein L35; KEGG: pol:Bpro_2104 ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.988
rplU	rpsB	Aave_3675	Aave_1823	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein S2; KEGG: pol:Bpro_2695 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.991
rplU	rpsF	Aave_3675	Aave_1228	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.990
rplU	rpsL	Aave_3675	Aave_0333	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy.	0.989
rplU	rpsO	Aave_3675	Aave_1258	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.989
rplU	rpsP	Aave_3675	Aave_1884	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein S16; KEGG: pol:Bpro_1690 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.992
rplU	rpsT	Aave_3675	Aave_1167	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.	0.990
rplU	rpsU	Aave_3675	Aave_2092	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein S21; KEGG: rfr:Rfer_2885 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.988

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