Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_2115PFAM: luciferase family protein; KEGG: rso:RS03171 putative luciferase (monooxygenase) oxidoreductase protein. (352 aa)    
Predicted Functional Partners:
Aave_2116
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: psb:Psyr_1538 propionyl-CoA carboxylase.
       0.773
Aave_3973
PFAM: luciferase family protein; KEGG: dar:Daro_1097 luciferase-like.
 
   
 0.755
Aave_4216
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: psp:PSPPH_3750 non-ribosomal peptide synthetase.
     
 0.557
Aave_0879
PFAM: NADPH-dependent FMN reductase; KEGG: bcn:Bcen_5790 FMN reductase.
 
 
 0.526
Aave_2781
PFAM: NADPH-dependent FMN reductase; KEGG: rme:Rmet_5075 NADPH-dependent FMN reductase.
 
 
 0.520
Aave_2117
Alpha,alpha-trehalase; PFAM: glycoside hydrolase, family 37; KEGG: spt:SPA3459 cytoplasmic trehalase.
       0.506
Aave_3733
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: nmu:Nmul_A1832 amino acid adenylation.
     
 0.401
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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