Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_2124PFAM: major facilitator superfamily MFS_1; KEGG: ppu:PP_2366 antibiotic MFS transporter, putative. (431 aa)    
Predicted Functional Partners:
Aave_2125
Hypothetical protein.
       0.773
Aave_0661
TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: pol:Bpro_4595 nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.661
Aave_0663
TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase, delta subunit; KEGG: pol:Bpro_4593 nitrate reductase molybdenum cofactor assembly chaperone.
  
  
 0.562
Aave_0662
KEGG: rfr:Rfer_2793 nitrate reductase, beta subunit; TIGRFAM: nitrate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
  
 0.560
Aave_0664
TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase, gamma subunit; KEGG: pol:Bpro_4592 respiratory nitrate reductase, gamma subunit.
  
  
 0.547
Aave_1619
TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; KEGG: ppu:PP_3877 hypothetical protein.
   
    0.477
Aave_2123
TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter-related protein; KEGG: bxe:Bxe_A0918 excinuclease ABC, A subunit.
     
 0.473
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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