Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_2163PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rfr:Rfer_2529 AAA_3 ATPase. (306 aa)    
Predicted Functional Partners:
Aave_2161
PFAM: transglutaminase domain protein; KEGG: rfr:Rfer_2531 transglutaminase-like.
 
   
 0.857
Aave_2162
PFAM: protein of unknown function DUF58; KEGG: pol:Bpro_3147 protein of unknown function DUF58.
 
  
 0.813
Aave_1062
PFAM: protein of unknown function DUF58; KEGG: pol:Bpro_3892 protein of unknown function DUF58.
  
 0.793
Aave_3257
PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: pol:Bpro_2415 lysine decarboxylase.
   
 
 0.594
Aave_2164
PFAM: histone deacetylase superfamily; KEGG: pol:Bpro_3145 histone deacetylase superfamily.
       0.593
Aave_1061
PFAM: von Willebrand factor, type A; KEGG: pol:Bpro_3893 von Willebrand factor, type A.
 
  
 0.521
Aave_2165
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reu:Reut_A2554 enoyl-CoA hydratase/isomerase.
       0.516
Aave_2160
TIGRFAM: lytic murein transglycosylase B; KEGG: rfr:Rfer_2545 lytic murein transglycosylase B.
       0.424
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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