STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_2184PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_0054 GCN5-related N-acetyltransferase. (297 aa)    
Predicted Functional Partners:
Aave_2183
PFAM: protein of unknown function DUF861, cupin_3; KEGG: nar:Saro_2687 protein of unknown function DUF861, cupin_3.
 
     0.830
Aave_2182
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: bcn:Bcen_6449 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
 
     0.808
Aave_2185
TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pol:Bpro_0056 haloacid dehalogenase, type II.
  
     0.774
Aave_3757
TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pol:Bpro_0056 haloacid dehalogenase, type II.
  
     0.774
Aave_2806
PFAM: FAD dependent oxidoreductase; KEGG: bcn:Bcen_6437 FAD dependent oxidoreductase.
  
     0.772
Aave_2186
PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_0057 FAD dependent oxidoreductase.
  
     0.769
Aave_2187
PFAM: extracellular solute-binding protein, family 5; KEGG: pol:Bpro_0058 extracellular solute-binding protein, family 5.
  
     0.767
Aave_2178
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pol:Bpro_0045 HAD-superfamily hydrolase, subfamily IA, variant 2.
  
     0.759
Aave_2181
PFAM: aminotransferase class-III; KEGG: pol:Bpro_0052 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.622
Aave_2190
PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_0061 ABC transporter-related protein; Belongs to the ABC transporter superfamily.
  
    0.606
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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