Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
Aave_2196Transcriptional regulator, AraC family with amidase-like domain; PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: bpm:BURPS1710b_1023 AraC family transcriptional regulator. (334 aa)    
Predicted Functional Partners:
Aave_2197
PFAM: GCN5-related N-acetyltransferase; KEGG: bha:BH0699 ribosomal-protein-alanine N-acetyltransferase.
 
     0.773
Aave_2198
KEGG: bur:Bcep18194_B2977 hypothetical protein.
       0.619
Aave_2195
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pol:Bpro_3129 alcohol dehydrogenase, zinc-binding; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
       0.478
Aave_3134
PFAM: regulatory protein, TetR; KEGG: ccr:CC1664 transcriptional regulator, TetR family.
  
     0.467
Aave_0247
PFAM: protein of unknown function UPF0074; Helix-turn-helix, type 11 domain protein; KEGG: rso:RSc2673 putative repressor transcription regulator protein.
  
     0.463
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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