Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Aave_2249Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: bte:BTH_I2345 ribose ABC transporter, permease protein; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family. (338 aa)    
Predicted Functional Partners:
Aave_2251
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bcn:Bcen_5626 ABC transporter-related protein; TC 3.A.1.2.-.
 
 0.994
Aave_2253
PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: mlo:mll5657 sugar ABC transporter (ATP-binding protein).
 
 0.993
Aave_2255
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bte:BTH_I2342 periplasmic ribose-binding protein; TC 3.A.1.2.-.
 0.989
Aave_2250
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: bcn:Bcen_5625 inner-membrane translocator; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.988
Aave_2254
Multiple monosaccharide-binding protein; KEGG: bms:BRA0937 sugar ABC transporter, periplasmic sugar-binding protein.
  
 0.980
Aave_2252
Multiple monosaccharide ABC transporter membrane protein; PFAM: inner-membrane translocator; KEGG: mes:Meso_0840 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.955
Aave_4196
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpm:BURPS1710b_2019 ribose ABC transporter, periplasmic ribose-binding protein; TC 3.A.1.2.-.
 
 
 0.912
Aave_4197
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B0574 ABC sugar transporter, fused ATPase subunits; TC 3.A.1.2.-.
 
 
 0.899
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.867
Aave_2248
L-arabinonate dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: bcn:Bcen_5215 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.610
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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