Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Aave_2282KEGG: rpa:RPA3597 hypothetical protein. (549 aa)    
Predicted Functional Partners:
Aave_2281
PFAM: protein of unknown function DUF1501; KEGG: rpa:RPA3596 hypothetical protein.
 
     0.913
Aave_4705
PFAM: protein of unknown function DUF1501; KEGG: eli:ELI_01985 hypothetical protein.
 
     0.730
Aave_4738
PFAM: protein of unknown function DUF350; KEGG: aba:Acid345_0110 protein of unknown function DUF350.
  
     0.459
Aave_2283
PFAM: extracellular solute-binding protein, family 1; KEGG: bmb:BruAb2_0537 sugar ABC transporter, periplasmic sugar-binding protein; TC 3.A.1.1.-.
       0.442
Aave_4740
KEGG: dar:Daro_3752 putative transmembrane protein.
 
     0.432
Aave_1377
Phospholipase C; PFAM: phosphoesterase; protein of unknown function DUF756; KEGG: bpm:BURPS1710b_A1577 phospholipase C.
  
     0.413
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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