Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Aave_2335Putative phage repressor; PFAM: helix-turn-helix domain protein; peptidase S24, S26A and S26B; KEGG: net:Neut_1484 putative phage repressor. (245 aa)    
Predicted Functional Partners:
Aave_2336
KEGG: eba:ebB253 hypothetical protein.
     
 0.567
Aave_2339
KEGG: pfl:PFL_3776 hypothetical protein.
       0.560
Aave_2340
KEGG: psb:Psyr_2809 hypothetical protein.
       0.558
Aave_2337
Hypothetical protein.
       0.552
Aave_2338
Hypothetical protein.
       0.552
Aave_4603
PFAM: Spore coat U domain protein; KEGG: bte:BTH_I2676 spore coat protein U domain family.
  
     0.456
Aave_1954
KEGG: rso:RSc0762 hypothetical protein.
  
     0.440
Aave_1750
Phage repressor protein; PFAM: helix-turn-helix domain protein; peptidase S24, S26A and S26B; KEGG: psb:Psyr_2812 helix-turn-helix motif:peptidase S24, S26A and S26B; Serine peptidase; MEROPS family S24.
 
   
 0.413
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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