Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Aave_2368KEGG: nmu:Nmul_A1450 hypothetical protein. (206 aa)    
Predicted Functional Partners:
Aave_2369
KEGG: yps:YPTB1818 hypothetical protein.
       0.812
Aave_2367
Hypothetical protein.
       0.773
Aave_2370
Hypothetical protein.
       0.568
Aave_2366
Hypothetical protein.
       0.565
Aave_2371
Hypothetical protein; KEGG: mxa:MXAN_1429 response regulator receiver domain/DnaJ domain protein.
       0.531
Aave_2372
Hypothetical protein; KEGG: bba:Bd2582 cell wall surface anchor family protein.
       0.531
Aave_2373
Hypothetical protein.
       0.531
Aave_2374
KEGG: vvy:VVA0838 hypothetical protein.
       0.513
Aave_2365
KEGG: bhe:BH14010 expressed protein.
       0.510
Aave_2376
KEGG: rfr:Rfer_4390 hypothetical protein.
       0.472
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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