Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Aave_2401PFAM: transposase IS3/IS911 family protein; KEGG: mxa:MXAN_1716 transposase orfA, IS3 family. (107 aa)    
Predicted Functional Partners:
Aave_2400
PFAM: Integrase, catalytic region; KEGG: mxa:MXAN_4473 transposase orfB, IS3 family.
  
    0.680
Aave_2402
PFAM: Zonular occludens toxin; KEGG: ype:YPO2279 putative phage-related membrane protein.
       0.524
Aave_2403
Hypothetical protein.
       0.524
Aave_2404
KEGG: cal:orf19.1725 hypothetical protein, serine/threonine rich.
       0.524
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.