Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Aave_2452PFAM: protein of unknown function DUF883, ElaB; KEGG: cvi:CV3467 transmembrane protein. (107 aa)    
Predicted Functional Partners:
Aave_2453
Hypothetical protein.
  
  
 0.782
Aave_0595
PFAM: Ferritin, Dps family protein; KEGG: rso:RSc2687 putative DNA protection during starvation or oxydative stress transcription regulator protein; Belongs to the Dps family.
  
  
 0.769
Aave_4170
PFAM: Peptidoglycan-binding LysM; transport-associated; KEGG: eba:ebA3069 conserved hypothetical protein, probably involved in cell wall turnover.
   
  
 0.714
Aave_0009
PFAM: OsmC family protein; KEGG: rru:Rru_A0580 OsmC-like protein.
   
  
 0.707
Aave_2454
Hypothetical protein.
       0.685
Aave_2451
PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_2706 FAD dependent oxidoreductase.
  
    0.585
Aave_0312
PFAM: CsbD family protein; KEGG: pol:Bpro_1152 CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
  
 0.528
Aave_2450
PFAM: histone deacetylase superfamily; KEGG: pol:Bpro_2707 histone deacetylase superfamily.
       0.520
Aave_4591
KEGG: pfl:PFL_1145 hypothetical protein.
  
  
 0.449
Aave_2831
KEGG: reu:Reut_B5231 transglycosylase-associated protein.
  
  
 0.445
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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