STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_2575TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: gsu:GSU1550 4-oxalocrotonate tautomerase family protein. (81 aa)    
Predicted Functional Partners:
Aave_0405
TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: pol:Bpro_4532 4-oxalocrotonate tautomerase family enzyme.
     
  0.900
Aave_3464
KEGG: reu:Reut_A2880 4-oxalocrotonate tautomerase.
     
  0.900
Aave_2576
KEGG: sil:SPO1192 hypothetical protein.
 
     0.899
Aave_2574
PFAM: glutathione S-transferase, N-terminal domain; glutathione S-transferase, C-terminal domain; KEGG: rfr:Rfer_0047 glutathione S-transferase-like; Belongs to the GST superfamily.
       0.709
Aave_2577
KEGG: jan:Jann_3318 glyoxalase/bleomycin resistance protein/dioxygenase.
       0.545
Aave_2573
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_3413 transcriptional regulator, LysR family.
       0.491
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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