Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_2595PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain; KEGG: pol:Bpro_3104 galactarate dehydratase. (518 aa)    
Predicted Functional Partners:
Aave_3623
D-glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: reu:Reut_B3715 glucarate dehydratase.
 
 
 0.978
Aave_2587
PFAM: dihydrodipicolinate synthetase; KEGG: rme:Rmet_4736 dihydrodipicolinate synthetase; Belongs to the DapA family.
 
  
 0.952
Aave_2593
PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: pol:Bpro_3106 tripartite ATP-independent periplasmic transporter, DctQ component.
 
     0.781
Aave_2596
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: rso:RS05371 putative gluconolactonase precursor (D-glucono-delta-lactone lactonohydrolase) protein.
 
   
 0.756
Aave_2592
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_3107 TRAP dicarboxylate transporter, DctP subunit.
 
     0.705
Aave_2594
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bja:bll6056 dicarboxylate transporter membrane protein.
 
     0.691
Aave_4270
PFAM: HpcH/HpaI aldolase; KEGG: reu:Reut_C5927 2-dehydro-3-deoxyglucarate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
 
  0.672
Aave_2589
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: psp:PSPPH_4253 transcriptional regulator, GntR family.
 
   
 0.595
Aave_2590
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: pfo:Pfl_3452 NAD-dependent epimerase/dehydratase.
 
   
 0.583
Aave_2591
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: pst:PSPTO_1052 senescence marker protein-30 family protein.
 
   
 0.522
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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