Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_2705PFAM: transposase Tn3 family protein; KEGG: xcv:XCVb0015 Tn5045 transposase. (991 aa)    
Predicted Functional Partners:
Aave_2703
KEGG: xac:XACb0070 hypothetical protein.
 
     0.851
Aave_2704
PFAM: PilT protein domain protein; SMART: Nucleotide binding protein, PINc; KEGG: xac:XACb0069 hypothetical protein.
 
     0.828
Aave_2702
PFAM: Resolvase, N-terminal domain; KEGG: xac:XACb0071 Tn5045 resolvase.
 
   
 0.818
Aave_2706
TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; KEGG: xcv:XCVc0036 hypothetical protein.
       0.718
Aave_2944
PFAM: Resolvase, N-terminal domain; KEGG: xac:XACb0071 Tn5045 resolvase.
 
   
 0.660
Aave_2396
PFAM: Resolvase, N-terminal domain; KEGG: mmr:Mmar10_1503 resolvase.
 
   
 0.592
Aave_2399
PFAM: Resolvase, N-terminal domain; KEGG: mmr:Mmar10_1503 resolvase.
 
   
 0.580
Aave_3594
PFAM: Resolvase, N-terminal domain; KEGG: xac:XACb0061 invertase recombinase-like protein.
 
   
 0.577
Aave_2707
PFAM: transposase, IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4.
       0.431
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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