Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Aave_2707PFAM: transposase, IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4. (270 aa)    
Predicted Functional Partners:
Aave_2706
TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; KEGG: xcv:XCVc0036 hypothetical protein.
       0.459
Aave_2703
KEGG: xac:XACb0070 hypothetical protein.
       0.431
Aave_2704
PFAM: PilT protein domain protein; SMART: Nucleotide binding protein, PINc; KEGG: xac:XACb0069 hypothetical protein.
       0.431
Aave_2705
PFAM: transposase Tn3 family protein; KEGG: xcv:XCVb0015 Tn5045 transposase.
       0.431
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.