Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_2807PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: pol:Bpro_1683 TonB-dependent receptor. (713 aa)    
Predicted Functional Partners:
Aave_3008
PFAM: PepSY-associated TM helix domain protein; KEGG: neu:NE2432 hypothetical protein.
 
     0.592
Aave_1367
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: bbr:BB1785 putative ferrisiderophore receptor.
  
   
 0.591
Aave_2054
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: bur:Bcep18194_A4489 TonB-dependent siderophore receptor.
  
   
 0.572
Aave_3918
PFAM: PepSY-associated TM helix domain protein; KEGG: rpb:RPB_3524 PepSY-associated TM helix.
 
     0.570
Aave_1201
KEGG: bcn:Bcen_4476 hypothetical protein.
  
 
   0.541
Aave_1370
PFAM: PepSY-associated TM helix domain protein; KEGG: bbr:BB3604 putative iron uptake protein.
 
   
 0.540
Aave_3007
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: bbr:BB1846 putative ferric siderophore receptor.
  
   
 0.525
Aave_3311
Outer membrane transport energization protein TonB; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: pol:Bpro_3051 TonB-like; TC 2.C.1.1.1.
 
 
 
 0.521
Aave_0232
KEGG: pol:Bpro_0182 hypothetical protein.
  
     0.510
Aave_2809
KEGG: pol:Bpro_1681 hypothetical protein.
       0.500
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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