Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_2834PFAM: protein of unknown function DUF55; KEGG: bps:BPSL0973 hypothetical protein. (171 aa)    
Predicted Functional Partners:
Aave_2832
KEGG: pol:Bpro_1991 hypothetical protein.
       0.776
Aave_2833
PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases-like; KEGG: bxe:Bxe_B1664 putative helicase.
       0.773
Aave_2831
KEGG: reu:Reut_B5231 transglycosylase-associated protein.
       0.710
Aave_1292
PFAM: heat shock protein Hsp20; KEGG: cvi:CV1177 probable small heat shock protein; Belongs to the small heat shock protein (HSP20) family.
   
    0.460
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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