STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_2882Hypothetical protein. (83 aa)    
Predicted Functional Partners:
Aave_2883
KEGG: mca:MCA2677 hypothetical protein.
       0.520
Aave_2884
KEGG: mca:MCA2676 hypothetical protein.
       0.520
Aave_2885
Hypothetical protein.
       0.514
Aave_2886
KEGG: mca:MCA2674 hypothetical protein.
       0.514
Aave_2887
KEGG: eba:ebA7239 hypothetical protein.
       0.514
Aave_2888
KEGG: mca:MCA2672 hypothetical protein.
       0.514
Aave_2889
Hypothetical protein; KEGG: rso:RSc0874 probable transmembrane protein.
       0.514
Aave_2890
TIGRFAM: phage tape measure protein; KEGG: eba:ebA7243 phage-related minor tail protein.
       0.514
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.