Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_3016PFAM: aldo/keto reductase; KEGG: pae:PA3795 probable oxidoreductase. (325 aa)    
Predicted Functional Partners:
Aave_3015
PFAM: Chromate transporter; KEGG: pol:Bpro_3027 chromate transporter.
 
    0.594
Aave_0715
PFAM: aldo/keto reductase; KEGG: sme:SMc01429 putative oxidoreductase protein.
 
 
0.569
Aave_0287
PFAM: aldo/keto reductase; KEGG: rso:RSc1154 putative reductase oxidoreductase protein.
 
 
0.543
Aave_3014
PFAM: Chromate transporter; KEGG: pol:Bpro_3026 chromate transporter.
  
    0.541
Aave_3136
PFAM: Ankyrin; KEGG: xcv:XCV4121 putative secreted protein.
  
 
 
 0.429
Aave_2164
PFAM: histone deacetylase superfamily; KEGG: pol:Bpro_3145 histone deacetylase superfamily.
   
  0.409
Aave_2450
PFAM: histone deacetylase superfamily; KEGG: pol:Bpro_2707 histone deacetylase superfamily.
   
  0.409
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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