Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_3045KEGG: rfr:Rfer_1779 ABC transporter, substrate-binding protein, aliphatic sulphonates; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3. (329 aa)    
Predicted Functional Partners:
Aave_3042
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_1776 binding-protein-dependent transport systems inner membrane component.
 
 0.996
ssuB
ABC transporter-related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 0.991
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
 
 0.990
Aave_0879
PFAM: NADPH-dependent FMN reductase; KEGG: bcn:Bcen_5790 FMN reductase.
 
 
 0.977
Aave_2781
PFAM: NADPH-dependent FMN reductase; KEGG: rme:Rmet_5075 NADPH-dependent FMN reductase.
 
 
 0.975
Aave_2648
KEGG: pol:Bpro_2272 putative signal peptide protein.
  
  
  0.916
Aave_0047
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A4207 ABC taurine transporter, inner membrane subunit.
 
 
 0.870
Aave_2968
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1046 binding-protein-dependent transport systems inner membrane component.
 
 
 0.864
Aave_4514
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_3099 binding-protein-dependent transport systems inner membrane component.
 
 
 0.781
Aave_0878
PFAM: luciferase family protein; KEGG: bcn:Bcen_5789 luciferase-like.
 
  
 0.759
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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