Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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Score
Aave_3066PFAM: protein kinase; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bte:BTH_I0514 protein kinase domain protein. (1311 aa)    
Predicted Functional Partners:
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.844
Aave_4681
PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; KEGG: pol:Bpro_4678 protein serine/threonine phosphatase.
 
 
 0.836
Aave_1469
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: dar:Daro_3311 protein phosphatase 2C-like.
 
 
 0.834
Aave_3080
Putative adenylate/guanylate cyclase; PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rfr:Rfer_2284 putative adenylate/guanylate cyclase.
 
 
 0.820
Aave_3243
SMART: protein phosphatase 2C domain protein; KEGG: pol:Bpro_2619 protein serine/threonine phosphatase.
 
 
 0.819
Aave_3580
SMART: protein phosphatase 2C domain protein; KEGG: pol:Bpro_1338 protein serine/threonine phosphatase.
 
 
 0.811
Aave_4054
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bte:BTH_II0256 serine/threonine protein kinase.
  
   
 0.773
Aave_4680
PFAM: Forkhead-associated protein; KEGG: pol:Bpro_4677 FHA domain containing protein.
 
 
 
 0.753
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.750
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.741
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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