Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Aave_3084Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: rfr:Rfer_0371 extracellular ligand-binding receptor; TC 3.A.1.4.-. (386 aa)    
Predicted Functional Partners:
Aave_3174
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: dar:Daro_4043 extracellular ligand-binding receptor; TC 3.A.1.4.-.
  
  
  0.912
Aave_3401
PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_B1023 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; TC 3.A.1.4.-.
  
  
 
0.911
Aave_3159
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: pol:Bpro_2411 extracellular ligand-binding receptor; TC 3.A.1.4.-.
  
  
 
0.901
Aave_0783
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: bbr:BB0229 hypothetical protein; TC 3.A.1.4.-.
     
  0.900
Aave_1282
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: reu:Reut_A3369 extracellular ligand-binding receptor; TC 3.A.1.4.-.
     
  0.900
Aave_1283
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: rso:RSc3342 putative substrate-binding periplasmic (pbp) ABC transporter protein; TC 3.A.1.4.-.
     
  0.900
Aave_2154
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: rfr:Rfer_1487 putative transporter signal peptide protein; TC 3.A.1.4.-.
     
  0.900
Aave_2934
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: rfr:Rfer_2391 extracellular ligand-binding receptor; TC 3.A.1.4.-.
     
  0.900
Aave_4750
KEGG: bxe:Bxe_B2566 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; TC 3.A.1.4.-.
     
  0.900
Aave_1876
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: rfr:Rfer_3171 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.884
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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