STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_3088PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: sth:STH906 acylaminoacyl-peptidase. (661 aa)    
Predicted Functional Partners:
Aave_0589
Gamma-glutamyltransferase 2; PFAM: gamma-glutamyltranspeptidase; KEGG: pol:Bpro_1819 gamma-glutamyltransferase; Threonine peptidase; MEROPS family T03.
  
   
 0.515
Aave_2667
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rme:Rmet_3696 peptidase M20.
 
     0.450
Aave_3089
KEGG: reu:Reut_B4968 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzyme; DegT/DnrJ/EryC1/StrS aminotransferase.
       0.441
Aave_2022
KEGG: rfr:Rfer_2160 trehalose synthase-like; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain.
  
    0.434
Aave_2313
KEGG: rpd:RPD_2474 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; Threonine peptidase; MEROPS family T03.
  
   
 0.431
Aave_1114
KEGG: net:Neut_1843 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; Threonine peptidase; MEROPS family T03.
  
   
 0.407
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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