Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Aave_3115Hypothetical protein; KEGG: rfr:Rfer_3319 putative transmembrane protein. (290 aa)    
Predicted Functional Partners:
Aave_3113
RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: pol:Bpro_2316 sigma-24 (FecI-like); Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.965
Aave_3114
KEGG: rfr:Rfer_3320 putative transmembrane protein.
 
     0.957
Aave_3116
PFAM: RDD domain containing protein; KEGG: pol:Bpro_2313 hypothetical protein.
     
 0.855
Aave_3118
PFAM: conserved hypothetical protein 730; KEGG: pol:Bpro_2311 conserved hypothetical protein 730; Belongs to the LOG family.
       0.852
Aave_3117
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
       0.850
Aave_0435
Transporter, CPA2 family (2.A.37); PFAM: sodium/hydrogen exchanger; KEGG: pol:Bpro_4469 sodium/hydrogen exchanger; TC 2.A.37.
  
     0.725
Aave_0740
KEGG: pol:Bpro_0444 hypothetical protein.
  
     0.638
cobD-2
Conserved hypothetical protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
  
     0.633
Aave_4689
KEGG: pol:Bpro_0388 putative lipoprotein transmembrane.
  
     0.628
Aave_0933
PFAM: porin, Gram-negative type; KEGG: rme:Rmet_4834 porin, gram-negative type.
  
     0.622
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.