Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_3129Hypothetical protein; KEGG: xcc:XCC2025 serine protease. (285 aa)    
Predicted Functional Partners:
Aave_2102
Cellulase; PFAM: glycoside hydrolase, family 5; cellulose-binding, family II; KEGG: xcb:XC_0639 cellulase.
  
 
 0.632
Aave_2924
PFAM: glycoside hydrolase, family 5; KEGG: xcv:XCV0358 putative cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
 0.530
Aave_3590
PFAM: glycoside hydrolase, family 10; KEGG: xom:XOO_4171 secreted xylanase.
   
 
 0.522
Aave_3128
KEGG: pol:Bpro_1904 transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein, LuxR; PAS fold domain protein; SMART: PAS domain containing protein.
       0.506
Aave_1951
PFAM: lipolytic enzyme, G-D-S-L family; KEGG: xcv:XCV0889 putative secreted protein.
  
 
 0.442
Aave_2356
Hypothetical protein.
  
 
 0.442
Aave_3020
PFAM: lipolytic enzyme, G-D-S-L family; KEGG: pol:Bpro_3031 arylesterase.
  
 
 0.442
Aave_3276
Hypothetical protein.
  
 
 0.442
lolA
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
  
 0.439
Aave_0897
Hypothetical protein; KEGG: rso:RSc2775 probable harpin-related protein.
  
 
 0.414
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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