STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
katGCatalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (743 aa)    
Predicted Functional Partners:
Aave_3137
PFAM: Catalase domain protein; KEGG: xcb:XC_4037 catalase precursor; Belongs to the catalase family.
    
 0.917
Aave_3991
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
    
 0.917
Aave_2440
PFAM: aminotransferase, class I and II; KEGG: pol:Bpro_2175 aspartate transaminase.
     
 0.908
hisC
TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase, class I and II; KEGG: rfr:Rfer_2947 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.905
Aave_1546
PFAM: aminotransferase, class I and II; KEGG: rfr:Rfer_2615 aminotransferase, class I and II.
     
 0.905
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
     
  0.900
Aave_3705
PFAM: aminotransferase, class I and II; KEGG: psb:Psyr_0117 aminotransferase, class I and II.
     
  0.900
Aave_3888
PFAM: aminotransferase, class I and II; KEGG: bbr:BB1045 aspartate aminotransferase.
     
  0.900
Aave_4193
KEGG: pol:Bpro_4215 phenylalanine-4-hydroxylase, monomeric form; TIGRFAM: phenylalanine-4-hydroxylase; PFAM: aromatic amino acid hydroxylase.
     
  0.900
Aave_2470
Cyclohexadienyl dehydratase; PFAM: extracellular solute-binding protein, family 3; KEGG: pae:PA3475 cyclohexadienyl dehydratase precursor (prephenate dehydratase / arogenate dehydratase).
     
  0.800
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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