Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_3136PFAM: Ankyrin; KEGG: xcv:XCV4121 putative secreted protein. (201 aa)    
Predicted Functional Partners:
Aave_4631
PFAM: leucine-rich repeat protein; KEGG: xcb:XC_1553 leucin rich protein.
 
 0.923
apaH
Bis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
   
 0.831
Aave_4790
PFAM: cyclic nucleotide-binding; KEGG: pol:Bpro_4903 cyclic nucleotide-binding domain (cNMP-BD) protein.
    
 0.790
Aave_4628
PFAM: nuclear protein SET; SMART: SET-related domain protein; KEGG: rfr:Rfer_3954 nuclear protein SET.
    
 0.788
Aave_3536
PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: nwi:Nwi_2089 AAA ATPase.
    
 0.784
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 0.766
Aave_3408
PFAM: Ankyrin; KEGG: pol:Bpro_2515 ankyrin.
  
     0.765
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
 0.748
Aave_0097
PFAM: Calcium-binding EF-hand-containing protein; KEGG: pol:Bpro_0112 acid shock protein-like.
    
 0.745
Aave_3976
Putative signal transduction protein with EFhand domain; PFAM: Calcium-binding EF-hand-containing protein; KEGG: gbe:GbCGDNIH1_1190 hypothetical secreted protein.
    
 0.745
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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