Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_3160KEGG: pol:Bpro_2410 hypothetical protein. (178 aa)    
Predicted Functional Partners:
Aave_3161
PFAM: DNA polymerase III chi subunit, HolC; KEGG: rfr:Rfer_2117 DNA polymerase III chi subunit, HolC.
       0.852
pepA
Aminopeptidase A; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
       0.709
Aave_3163
PFAM: permease YjgP/YjgQ family protein; KEGG: rfr:Rfer_2115 permease YjgP/YjgQ.
       0.503
Aave_3164
PFAM: permease YjgP/YjgQ family protein; KEGG: rfr:Rfer_2114 permease YjgP/YjgQ.
       0.503
Aave_3165
PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: rfr:Rfer_2113 cobalamin (vitamin B12) biosynthesis CbiX protein.
       0.490
Aave_3159
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Extracellular ligand-binding receptor; KEGG: pol:Bpro_2411 extracellular ligand-binding receptor; TC 3.A.1.4.-.
       0.473
Aave_3166
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rfr:Rfer_2112 transcriptional regulator, LysR family.
       0.462
Aave_3167
PFAM: aminotransferase, class I and II; KEGG: rfr:Rfer_2111 aminotransferase, class I and II.
       0.448
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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