STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_3215PFAM: glutathione S-transferase, N-terminal domain; glutathione S-transferase, C-terminal domain; KEGG: bpm:BURPS1710b_3416 putative glutathione S-transferase-like protein; Belongs to the GST superfamily. (261 aa)    
Predicted Functional Partners:
Aave_3213
PFAM: uncharacterized protein UPF0065; KEGG: rme:Rmet_4286 uncharacterized protein UPF0065.
       0.727
Aave_3214
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: bbr:BB1545 putative biotin sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.727
Aave_3212
PFAM: Rhodanese domain protein; KEGG: bcn:Bcen_4490 3-mercaptopyruvate sulfurtransferase.
  
    0.695
Aave_3211
PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_2294 uncharacterized protein UPF0065.
       0.693
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.619
Aave_3209
4-phosphoerythronate dehydrogenase (FAD-dependent); PFAM: FAD linked oxidase domain protein; KEGG: eba:ebA4737 FAD dependent oxidoreductase.
 
    0.572
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.549
Aave_3210
3-carboxy-cis,cis-muconate cycloisomerase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: eca:ECA4197 probable lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.545
Aave_3216
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: fal:FRAAL4772 putative enoyl-CoA hydratase/isomerase family protein.
       0.527
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.520
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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