STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_3243SMART: protein phosphatase 2C domain protein; KEGG: pol:Bpro_2619 protein serine/threonine phosphatase. (267 aa)    
Predicted Functional Partners:
Aave_2464
TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rfr:Rfer_2214 dihydrolipoamide dehydrogenase.
  
 0.913
Aave_3581
PFAM: protein of unknown function RIO1; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: pol:Bpro_1337 serine/threonine protein kinase.
 
 
 0.850
Aave_1466
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bur:Bcep18194_B1590 serine/threonine protein kinase.
 
 
 0.848
Aave_4054
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bte:BTH_II0256 serine/threonine protein kinase.
 
 
 0.847
Aave_3066
PFAM: protein kinase; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bte:BTH_I0514 protein kinase domain protein.
 
 
 0.832
Aave_4680
PFAM: Forkhead-associated protein; KEGG: pol:Bpro_4677 FHA domain containing protein.
 
 
 0.772
Aave_4274
PFAM: protein kinase; UspA domain protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ade:Adeh_3699 serine/threonine protein kinase.
 
 
 0.753
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.624
Aave_3080
Putative adenylate/guanylate cyclase; PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rfr:Rfer_2284 putative adenylate/guanylate cyclase.
 
 
 0.575
Aave_3242
SMART: helicase c2; DEAD-like helicases-like; KEGG: rfr:Rfer_2316 helicase C2.
   
   0.574
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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