STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crcBCamphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (126 aa)    
Predicted Functional Partners:
Aave_3301
PFAM: conserved hypothetical protein 730; KEGG: pol:Bpro_3075 conserved hypothetical protein 730.
       0.766
Aave_3299
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pol:Bpro_1779 TRAP dicarboxylate transporter-DctM subunit.
       0.653
Aave_3298
KEGG: pol:Bpro_1778 hypothetical protein.
       0.476
Aave_3297
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_1774 TRAP dicarboxylate transporter-DctP subunit.
       0.475
Aave_3302
Hypothetical protein; KEGG: dme:Dmel_CG7274 CG7274.
       0.435
Aave_0144
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: bcn:Bcen_2938 acyl-CoA dehydrogenase-like.
   
    0.424
Aave_1841
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rme:Rmet_5893 acyl-CoA dehydrogenase-like protein.
   
    0.424
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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