Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_3396Rare lipoprotein A; PFAM: cellulose-binding, family II; Rare lipoprotein A; KEGG: hch:HCH_03669 endoglucanase C-terminal domain/subunit and related protein. (351 aa)    
Predicted Functional Partners:
Aave_2156
TIGRFAM: polymorphic outer membrane protein; PFAM: Polymorphic membrane protein, Chlamydia; KEGG: xom:XOO_0911 hypothetical protein.
  
     0.619
Aave_3434
PFAM: Pectate lyase/Amb allergen; KEGG: bsu:BG10840 pectate lyase.
  
   
 0.531
Aave_0897
Hypothetical protein; KEGG: rso:RSc2775 probable harpin-related protein.
  
     0.515
Aave_2102
Cellulase; PFAM: glycoside hydrolase, family 5; cellulose-binding, family II; KEGG: xcb:XC_0639 cellulase.
 
   
0.513
Aave_3395
Hypothetical protein.
       0.501
Aave_3060
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: bur:Bcep18194_B3161 FHA domain containing protein.
  
     0.455
Aave_0237
KEGG: mxa:MXAN_4169 hypothetical protein.
  
     0.438
Aave_2924
PFAM: glycoside hydrolase, family 5; KEGG: xcv:XCV0358 putative cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.423
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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