Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_3478TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: bxe:Bxe_A4426 rhs family protein. (553 aa)    
Predicted Functional Partners:
Aave_3796
TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: bur:Bcep18194_B1826 rhs family protein.
   
 0.943
Aave_0483
PFAM: PAAR repeat-containing protein; KEGG: bur:Bcep18194_B0648 rhs family protein.
     0.823
Aave_3426
DNA translocase FtsK; PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: pol:Bpro_3799 cell divisionFtsK/SpoIIIE.
  
 
 0.717
Aave_2639
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rfr:Rfer_2898 thioredoxin; Belongs to the thioredoxin family.
   
   0.538
Aave_2130
KEGG: bxe:Bxe_A4426 rhs family protein.
 
   
 0.420
Aave_3477
KEGG: bfs:BF1754 hypothetical protein.
       0.417
Aave_3733
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: nmu:Nmul_A1832 amino acid adenylation.
  
  
 0.401
Aave_2128
KEGG: bxe:Bxe_A4428 hypothetical protein.
 
    0.400
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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