Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_3554TIGRFAM: type IV pilus modification protein PilV; KEGG: rfr:Rfer_2660 methylation. (225 aa)    
Predicted Functional Partners:
Aave_3553
KEGG: rfr:Rfer_2661 putative transmembrane protein.
 
  
 0.994
Aave_3551
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; KEGG: rfr:Rfer_2663 putative type-4 fimbrial biogenesis PilY1-related signal peptide protein.
 
  
 0.991
Aave_3552
KEGG: rfr:Rfer_2662 putative transmembrane protein.
 
  
 0.991
Aave_3550
Tfp pilus assembly protein PilE; KEGG: rfr:Rfer_2664 methylation.
 
  
 0.987
Aave_3549
Tfp pilus assembly protein FimT; KEGG: rfr:Rfer_2665 methylation.
 
  
 0.977
Aave_3410
PFAM: type IV pilus assembly PilZ; KEGG: pol:Bpro_2517 type IV pilus assembly PilZ.
  
   
 0.772
Aave_0999
PFAM: Pilus assembly protein, PilQ; KEGG: pol:Bpro_0784 pilus assembly protein, PilQ.
  
  
 0.762
Aave_0998
PFAM: Pilus assembly protein, PilO; KEGG: pol:Bpro_0783 pilus assembly protein, PilO.
 
   
 0.726
Aave_4157
TIGRFAM: general secretion pathway protein H; KEGG: eba:ebA1616 general secretion protein H.
 
  
 0.711
Aave_3555
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
       0.706
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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