Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Aave_3576KEGG: ppu:PP_2462 hypothetical protein. (111 aa)    
Predicted Functional Partners:
Aave_1371
KEGG: bbr:BB3605 putative iron uptake protein.
  
     0.667
Aave_2153
KEGG: bte:BTH_I2816 hypothetical protein.
  
     0.639
Aave_3997
KEGG: xcb:XC_1758 hypothetical protein.
  
     0.588
Aave_0868
KEGG: pen:PSEEN4682 hypothetical protein.
  
     0.575
Aave_2435
Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase.
  
     0.549
Aave_1202
Small-conductance mechanosensitive channel-like protein; KEGG: pen:PSEEN0164 hypothetical protein.
  
     0.518
Aave_3575
PFAM: Sporulation domain protein; KEGG: rfr:Rfer_3167 sporulation related.
       0.506
Aave_3008
PFAM: PepSY-associated TM helix domain protein; KEGG: neu:NE2432 hypothetical protein.
  
     0.465
Aave_3656
PFAM: MscS Mechanosensitive ion channel; KEGG: bbr:BB1859 hypothetical protein.
  
     0.463
Aave_1330
PFAM: 17 kDa surface antigen; KEGG: pol:Bpro_3177 17 kDa surface antigen.
  
     0.448
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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