Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Aave_3590PFAM: glycoside hydrolase, family 10; KEGG: xom:XOO_4171 secreted xylanase. (325 aa)    
Predicted Functional Partners:
Aave_2102
Cellulase; PFAM: glycoside hydrolase, family 5; cellulose-binding, family II; KEGG: xcb:XC_0639 cellulase.
 
 
 
 0.850
Aave_3434
PFAM: Pectate lyase/Amb allergen; KEGG: bsu:BG10840 pectate lyase.
  
   
 0.663
Aave_3129
Hypothetical protein; KEGG: xcc:XCC2025 serine protease.
   
 
 0.522
Aave_0897
Hypothetical protein; KEGG: rso:RSc2775 probable harpin-related protein.
 
 
 
 0.511
Aave_1951
PFAM: lipolytic enzyme, G-D-S-L family; KEGG: xcv:XCV0889 putative secreted protein.
 
 
 
 0.459
Aave_4027
TIGRFAM: esterase, PHB depolymerase family; KEGG: rfr:Rfer_2576 esterase, PHB depolymerase.
   
 
 0.403
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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