STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aave_3654PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_CH03261 putative bleomycin resistance protein. (119 aa)    
Predicted Functional Partners:
Aave_3653
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter-related protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rfr:Rfer_1284 ABC transporter-related protein; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.
     
 0.728
Aave_3655
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pol:Bpro_0853 glycerophosphodiester phosphodiesterase.
       0.658
Aave_3656
PFAM: MscS Mechanosensitive ion channel; KEGG: bbr:BB1859 hypothetical protein.
       0.600
Aave_1349
Conserved hypothetical protein; KEGG: psb:Psyr_1160 similar to uncharacterized protein conserved in bacteria.
   
 
 0.590
ugpE
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
     
 0.553
Aave_3651
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0856 binding-protein-dependent transport systems inner membrane component; TC 3.A.1.1.-.
       0.545
Aave_3618
Hypothetical protein.
  
 
 0.470
Aave_4520
PFAM: HipA domain protein; KEGG: pol:Bpro_0337 HipA-like.
  
 
 0.470
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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