Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Aave_3752PFAM: Rhs element Vgr protein; KEGG: bps:BPSS2093 hypothetical protein. (755 aa)    
Predicted Functional Partners:
Aave_1471
PFAM: protein of unknown function DUF876; KEGG: bur:Bcep18194_B1594 protein of unknown function DUF876.
 
  
 0.818
Aave_1472
PFAM: OmpA/MotB domain protein; KEGG: bbr:BB0815 hypothetical protein.
 
  
 0.818
Aave_1478
PFAM: virulence protein, SciE type; KEGG: xac:XAC4144 hypothetical protein.
 
  
 0.797
Aave_1476
PFAM: uncharacterized conserved protein UCP028301; KEGG: bte:BTH_II0121 protein of unknown function (DUF770) superfamily.
 
  
 0.795
Aave_1473
PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: bbr:BB0816 hypothetical protein.
 
  
 0.793
Aave_1480
PFAM: protein of unknown function DUF879; KEGG: bpa:BPP0719 hypothetical protein.
 
  
 0.793
Aave_1481
PFAM: protein of unknown function DUF1305; KEGG: bur:Bcep18194_B1583 protein of unknown function DUF1305.
 
  
 0.793
Aave_1477
PFAM: protein of unknown function DUF877; KEGG: bbr:BB0801 hypothetical protein.
 
  
 0.792
Aave_1479
PFAM: protein of unknown function DUF1316; KEGG: bbr:BB0804 hypothetical protein.
 
  
 0.792
Aave_1465
PFAM: protein of unknown function DUF796; KEGG: bpa:BPP0716 hypothetical protein.
 
  
 0.790
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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